PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000157070
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 157aa    MW: 17389.6 Da    PI: 5.626
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000157070genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.41.6e-1146105152
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLp.kkvk 52 
                    lp+G++F+Ptd+el+ e+L++kve+k+      ++++   i+   +i++++P++Lp + vk
  MDP0000157070  46 LPAGVKFDPTDQELI-EHLEAKVEAKDskshplIDEFIPtIEGXdGICYTHPEKLPvQPVK 105
                    799************.99*******996665443333333777756*********944333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-942103IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MSKSNLGSIR SSDLIDAKLE EHQMCGSKQC PGCGHKFEGK PDWLGLPAGV KFDPTDQELI  60
EHLEAKVEAK DSKSHPLIDE FIPTIEGXDG ICYTHPEKLP VQPVKGEDSV DQSDMATIAL  120
SNYRPLDDSE IWRIYLRGLS RLLVLGIKGI GKSSIRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF1981141e-147KF198114.1 Malus hupehensis NAC domain protein (NAC16) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352580.11e-64PREDICTED: uncharacterized protein LOC103943930 isoform X1
RefseqXP_009352581.11e-64PREDICTED: uncharacterized protein LOC103943930 isoform X1
TrEMBLM5W1R33e-62M5W1R3_PRUPE; Uncharacterized protein
STRINGVIT_11s0016g02880.t015e-59(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.12e-55NAC domain containing protein 75